Upcoming events hosted by or involving Genetics Otago will be listed here. Please check back regularly for updates. A calendar of events that may be of interest to our members can be found at the bottom of this page and in the sidebar of other pages on this site, please note that this includes events hosted outside of Genetics Otago.
GO Annual Symposium – POSTPONED
As usual, the Symposium will highlight the fantastic research being done by GO members from around the country through presentations, posters and awards.
Date: New date TBC (tentatively 20th February 2025)
Time: 9:00 am – 5:00 pm
Venue: TBC
Programme
A draft programme will be available here soon.
Registration
Registration for this event will open closer to time.
Registration Fee
Due to budget constraints, we will be charging a $50 per person registration fee for all attendees to subsidise the costs associated with the Symposium. We have received confirmation that this registration fee can be paid from S accounts, and if you are in a position to make a donation on top of this fee, we would gladly receive it. However, we do not want the payment to be a barrier to attendance, so if you are not in a position to make a payment, please contact us go@otago.ac.nz.
Payment Methods
Payments from an S account (or other University account) can be journaled to Genetics Otago account GL.10.LH.A14.2541 via your finance associate. Please include the surname(s) of the registrants that the payment covers in the narration.
If you need to make payment using funds from outside the University this can be arranged via the Cashier’s Office. Please contact us for details (go@otago.ac.nz).
Awards
The Annual Genetics Otago Awards including The Genetics Otago Award, Outstanding Mentor Awards, Student Supervisor Award, Publication Awards, Poster Awards and Science Communication Prize will be presented at the conclusion of the Symposium and nominations for these are now open.
All award nominations should be submitted by email to go@otago.ac.nz.
Full details of the awards can be found here: Award Details.
Oxford Nanopore Technology Workshop
Join us at Ōtākou Whakaihu Waka, Dunedin, for a one day Oxford Nanopore Technology symposium. This event, jointly hosted by Genomics Aotearoa and the Genetics Otago ONT hub, will feature research talks highlighting different ONT use cases, a technical sequencing demonstration and an EPI2ME workshop.
This is an in-person event being held on Friday, December 6th at the Ōtākou Whakaihu Waka / University of Otago campus.
Registration for this event is free of charge.
This event is sponsored by ONT, and is supported by the Otago Genomics Facility.
Contact tyler.mcinnes@otago.ac.nz for any queries.
CRISPR Workshop
This event is designed to cater to the diverse community of researchers at the University of Otago who are using or interested in using the CRISPR-Cas diagnostics toolkit. We warmly welcome everyone to attend.
For the workshop, you will need a laptop with either a macOS or a Windows operating system (with Windows Linux subsystem installed). Optionally, it would be advantageous if you have Geneious Prime software installed (a free trial time can be obtained on the official website)
Date: Wednesday 13th December 2024
Time: 9:00 am – 2:00 pm
Venue: Hunter Centre, Room 1.18
Programme: CRISPR-Dx Programme
Please register your attendance using the button below. The workshop will only go ahead if >10 people register, with a cap limit of 20. A final decision will be delivered on December 4th if it goes ahead with the corresponding detailed programme.
Calendar of Events
The below is a calendar of events hosted by GO as well as events hosted by others that may be of interest to our members. If you have an event you would like us to include please contact us here.
Hosted at the University of Otago, the Bioinformatics Spring School 2023 is a week long training event for researchers, supported by Genomics Aotearoa and the New Zealand eScience Infrastructure (NeSI). This event is primarily targeted at researchers and students based in Aotearoa New Zealand. International applications will be considered but will need to be able to attend in-person.
Expressions of interest applications are now open and will close midnight, Friday 29th September 2023.
Full Details: https://otagobioinformaticsspringschool.github.io/2023/
7-9 February 2024 | Wellington
eResearch NZ is the leading conference for the research community in Aotearoa, New Zealand. Each year, it brings people together to connect, converse, and share their latest ideas and innovations.
In 2024, we’ll be hosting the event in Wellington. Our strategic theme is He Moana Pukepuke e Ekengia e te Waka | Navigating an evolving eResearch landscape
Together with the research community, we’ll be showcasing new innovations, technology and research while helping each other navigate the challenges in our changing field.
eResearch NZ is a collaborative initiative organised by REANNZ, NeSI and Genomics Aotearoa with the support of the wider community.
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Genomics Aotearoa is pleased to announce its Friday seminar series starts with Andelka Philips and Jan Charbonneau (University of Tasmania) on Friday, March 8 at 3pm, talking on “Privacy and the World of DTC – Data Breaches are already happening.” This is a follow-on from the very successful update Andelka gave our Genomics Aotearoa community last year on their genetics privacy survey.
RNA-seq Data Analysis
This online workshop is delivered by Genomics Aotearoa and NeSI, and will be taught from 10:00am-4:00pm NZT on the Wednesday 20th of March, 2024. It is for New Zealand researchers interested in RNA-seq data analysis. The focus of this workshop is to analyse RNA-seq data with the aim to identify differentially expressed genes.
Some of the topics covered in the workshop are:
- Quality assessment
- Trimming and filtering
- Mapping and read counts
- Differential expression analysis
- Over-representation analysis
Who this workshop is for:
This is a beginner-friendly workshop which assumes you are familiar with the basics of R ( e.g., you can copy basic functions like head, tail, or colSums, you are aware of how R stores files as Objects) and bash (e.g., can change directory with cd command, make a new folder with mkdir command, view contents using less command). If you would like a refresher on R you can find one here. If you would like a refresher on bash you can find one here.
Setup
This is a fully online, hands-on workshop. This workshop material will be run on the NeSI High Performance Computing (HPC) platforms – there is no need to install any software for this workshop. Instructions on how to access the NeSI HPC service will be sent out with the confirmation letter to registrants.
The material for this workshop can be previewed here.
Participants must have their own laptops and plan to participate actively. You will require a working web browser.
Register for this workshop at Eventbrite.
If you have any questions about these workshops, including whether they are suitable for you, please contact tyler.mcinnes@otago.ac.nz.
On Friday March 22 at 10 am we present another international speaker – Ronald Jenner, Principal Researcher at the Natural History Museum in London. Ronald researches the evolution of animal venoms and the conceptual history of phylogenetics, and is the author of Venom: The secrets of nature’s deadliest weapon (with Eivind Undheim) and Ancestors in evolutionary biology. Linear thinking about branching trees.”
Ronald will be speaking to us live on “Seeing evolution through a cladistic blindfold; the challenges of thinking about evolving lineages in a world of taxa.” Please let colleagues know, and note the 10am start time.
SEMINAR: Seeing evolution through a cladistic blindfold; the challenges of thinking about evolving lineages in a world of taxa
Tēnā koutou katoa
We are pleased to invite you to our first Genomics Aotearoa seminar for 2024, online on Friday, February 23 at 10am.
We welcome an international speaker to start the seminar series – Dr Ronald Jenner, who is Principal Researcher at the National History Museum in London. Ronald will be speaking to us live on “Seeing evolution through a cladistic blindfold; the challenges of thinking about evolving lineages in a world of taxa.”
Please note the 10am start time.
We encourage you to invite colleagues to join our genomics community and take part in this seminar. Look forward to seeing you there. Questions and discussions are welcome.
Join from PC, Mac, iOS, or Android:
https://otago.zoom.us/j/97097442106?pwd=RlczU3VCdFBmbmt4Yng4VW5OcHdSdz09
About Ronald Jenner
Ronald is Principal Researcher at the Natural History Museum in London, UK. He researches the evolution of animal venoms and the conceptual history of phylogenetics. He is the author of Venom. The secrets of nature’s deadliest weapon (with Eivind Undheim) and Ancestors in evolutionary biology. Linear thinking about branching trees.”
This online workshop is delivered by Genomics Aotearoa and NeSI, and will be taught from 10:00am-4:00pm NZT on Wednesday the 27th of March, 2024, and is for New Zealand researchers interested in learning to write scripts and submit jobs to an HPC using a scheduler. This workshop is an excellent follow-up for everyone who has recently completed the Introduction to R and Introduction to Bash workshops, although these are not strictly prerequisites. You are expected to have some knowledge of basic terminal commands.
Some of the topics covered in the workshop are:
– Designing a variant calling workflow.
– Automating a workflow.
– An introduction to HPC.
– Working with job scheduler.
Setup
This is a fully online, hands-on workshop. This workshop material will be run on the NeSI High Performance Computing (HPC) platforms – there is no need to install any software for this workshop. Instructions on how to access the NeSI HPC service will be sent out with the confirmation letter to registrants.
The material for this workshop can be previewed here.
Participants must have their own laptops and plan to participate actively. You will require a working web browser.
If you have any questions about these workshops, including whether they are suitable for you, please contact tyler.mcinnes@otago.ac.nz.
