{"id":4034,"date":"2025-10-06T13:51:57","date_gmt":"2025-10-06T00:51:57","guid":{"rendered":"https:\/\/blogs.otago.ac.nz\/thesheet\/?page_id=4034"},"modified":"2025-10-06T14:52:15","modified_gmt":"2025-10-06T01:52:15","slug":"testing-gene-therapy-for-batten-disease-in-sheep","status":"publish","type":"page","link":"https:\/\/blogs.otago.ac.nz\/thesheet\/school-resources\/batten-disease\/testing-gene-therapy-for-batten-disease-in-sheep\/","title":{"rendered":"Testing gene therapy for Batten disease in sheep"},"content":{"rendered":"\n<h2 class=\"wp-block-heading\">Testing gene therapy for Batten disease in sheep<\/h2>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/www.otago.ac.nz\/biochemistry\/people\/profile?id=398\">Dr Stephanie Hughes<\/a> and her colleagues in the Otago Department of Biochemistry have been developing special viruses as a gene therapy treatment for Batten disease. <\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/dr-stephanie-hughes-left-and-students-in-her-research-lab-675863.jpg\"><img loading=\"lazy\" decoding=\"async\" width=\"650\" height=\"398\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/dr-stephanie-hughes-left-and-students-in-her-research-lab-675863.jpg\" alt=\"Three women and one man stand together inside a research laboratory.\" class=\"wp-image-4035\" srcset=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/dr-stephanie-hughes-left-and-students-in-her-research-lab-675863.jpg 650w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/dr-stephanie-hughes-left-and-students-in-her-research-lab-675863-300x184.jpg 300w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/dr-stephanie-hughes-left-and-students-in-her-research-lab-675863-490x300.jpg 490w\" sizes=\"auto, (max-width: 650px) 100vw, 650px\" \/><\/a><figcaption class=\"wp-element-caption\">Dr Stephanie Hughes (left) and students in her research lab. From left: Dr Stephanie Hughes and students Stephanie Mercer, Sophie Mathison and Oluwatobi Eboda in the Neurodegenerative and Lysosomal Disease Lab.<\/figcaption><\/figure>\n\n\n\n<p class=\"wp-block-paragraph\">To correct for the mutation in the CLN5 gene of people with Batten disease, the normal gene needs to be injected into thousands or even millions of cells where it is needed.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">If you simply insert a gene directly into a cell, it usually does not function. Viruses naturally inject their genetic material into cells in a way that allows the genes to help make proteins.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/www.sciencelearn.org.nz\/resources\/184-virus-strains\">Read more about viruses on the Science Learning Hub.<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">The viruses used in gene therapy are modified so they can&#8217;t cause disease.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">Three types of viruses can be used: retrovirus, adenovirus, or adeno-associated virus (most commonly used). All of these viruses introduce their DNA into the nucleus of a cell; retroviruses integrate their DNA into one of the cell&#8217;s chromosomes, whereas adenoviruses and adeno-associated viruses do not.<\/p>\n\n\n\n<div class=\"wp-block-group is-layout-grid wp-container-core-group-is-layout-9d260ee2 wp-block-group-is-layout-grid\">\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/electron-micrograph-of-hiv-retroviruses-680734.jpg\"><img loading=\"lazy\" decoding=\"async\" width=\"226\" height=\"119\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/electron-micrograph-of-hiv-retroviruses-680734.jpg\" alt=\"Image of black spheroid objects (with irregular white shapes\/outlines inside) on a white background.\" class=\"wp-image-4036\" \/><\/a><figcaption class=\"wp-element-caption\"><small>Electron micrograph of retroviruses (GrahamColm \/ English Wikipedia \/ <a href=\"https:\/\/commons.wikimedia.org\/w\/index.php?curid=3921907\">CC BY 3.0<\/a>).<\/small><\/figcaption><\/figure>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/electron-micrograph-of-adenoviruses-680733.jpg\"><img loading=\"lazy\" decoding=\"async\" width=\"226\" height=\"119\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/electron-micrograph-of-adenoviruses-680733.jpg\" alt=\"Image of white spheroid objects (that appear to be made of small white particles packed in a regular array) on a black background.\" class=\"wp-image-4037\" \/><\/a><figcaption class=\"wp-element-caption\"><small>Electron micrograph of adenoviruses (PhD Dre \/ English Wikipedia \/ <a href=\"http:\/\/www.gnu.org\/copyleft\/fdl.html\">GFDL<\/a> or <a href=\"https:\/\/creativecommons.org\/licenses\/by-sa\/3.0\">CC BY-SA 3.0<\/a> \/ via Wikimedia Commons).<\/small><\/figcaption><\/figure>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/adeno-associated-virus_226-685356.jpg\"><img loading=\"lazy\" decoding=\"async\" width=\"226\" height=\"119\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/adeno-associated-virus_226-685356.jpg\" alt=\"Image of light grey spheroid objects (made up of small blobs) on a darker grey background.\" class=\"wp-image-4038\" \/><\/a><figcaption class=\"wp-element-caption\"><small>Electron micrograph of adeno-associated viruses (Kenneth Raj Research Group, formerly of the NIMR, UK; <a href=\"https:\/\/microbewiki.kenyon.edu\/index.php\/Adeno-Associated_Viruses_as_Gene_Therapy_Vectors\">MicrobeWiki<\/a>).<\/small><\/figcaption><\/figure>\n<\/div>\n\n\n\n<p class=\"wp-block-paragraph\">Dr Hughes has been using lentivirus, a type of retrovirus, and adeno-associated virus&nbsp;&nbsp;to create and test gene therapy for treating Batten disease in sheep and mice.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">Before the gene therapy can be tested on human patients, a lot of research needs to be done in the lab.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">There are three main parts to this research:<\/p>\n\n\n\n<ol class=\"wp-block-list\">\n<li>Make the gene therapy virus.<\/li>\n\n\n\n<li>Test the gene therapy on cells cultured in a dish.<\/li>\n\n\n\n<li>Test the gene therapy in an animal model, in this case on sheep who naturally already have the Batten disease mutation.<\/li>\n<\/ol>\n\n\n\n<h2 class=\"wp-block-heading\">1) Make the gene therapy virus<\/h2>\n\n\n\n<p class=\"wp-block-paragraph\">To make the virus, the researchers need a DNA plasmid (a circle of DNA) which contains the correct CLN5 gene, and cells cultured (grown) in a dish inside an incubator. The cells sit in media, which is a liquid containing the nutrients they need to stay alive.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">The researchers make the plasmid using:<\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/www.sciencelearn.org.nz\/resources\/2035-restriction-enzymes\">restriction enzymes<\/a> &#8211; &#8216;scissor&#8217; proteins that cut DNA into pieces<\/li>\n\n\n\n<li><a href=\"https:\/\/www.sciencelearn.org.nz\/resources\/2034-dna-ligation\">ligases<\/a> &#8211; &#8216;glue&#8217; proteins that stick pieces of DNA together<\/li>\n\n\n\n<li><a href=\"https:\/\/www.sciencelearn.org.nz\/resources\/2347-what-is-pcr\">polymerase chain reaction (PCR)<\/a> or <a href=\"https:\/\/www.sciencelearn.org.nz\/resources\/2031-dna-cloning\">DNA cloning<\/a> &#8211; techniques which make multiple copies of the plasmid<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\">Here is an animation of a restriction enzyme and a ligase at work on a DNA plasmid:<\/p>\n\n\n\n<figure class=\"wp-block-embed is-type-video is-provider-youtube wp-block-embed-youtube wp-embed-aspect-16-9 wp-has-aspect-ratio\"><div class=\"wp-block-embed__wrapper\">\n<iframe loading=\"lazy\" title=\"Restriction Enzyme EcoR1 (2000) Drew Berry wehi.tv\" width=\"500\" height=\"281\" src=\"https:\/\/www.youtube.com\/embed\/aA5fyWJh5S0?feature=oembed\" frameborder=\"0\" allow=\"accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share\" referrerpolicy=\"strict-origin-when-cross-origin\" allowfullscreen><\/iframe>\n<\/div><\/figure>\n\n\n\n<p class=\"wp-block-paragraph\">Next, the researchers add the plasmid to the dish of cultured cells, along with another plasmid that contains genes that help build the lentivirus, and a chemical that makes the cell membranes a little leaky.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">The cells take up the plasmid DNA through their leaky membranes, and turn into little virus-making factories, spitting out the finished virus particles into the media.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">Finally, the researchers harvest the viruses from the media, which are ready to be used in gene therapy trials.<\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-showing-process-of-making-gene-therapy-viruses-680745.png\"><img loading=\"lazy\" decoding=\"async\" width=\"650\" height=\"339\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-showing-process-of-making-gene-therapy-viruses-680745.png\" alt=\"Schematic of making viruses - circles labeled as plasmids on the left, a shallow dish in the middle filled with small lumps made of small spheres lumped together, stylised virus diagrams on the right, arrows in between each part going left to right.\" class=\"wp-image-4039\" srcset=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-showing-process-of-making-gene-therapy-viruses-680745.png 650w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-showing-process-of-making-gene-therapy-viruses-680745-300x156.png 300w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-showing-process-of-making-gene-therapy-viruses-680745-500x261.png 500w\" sizes=\"auto, (max-width: 650px) 100vw, 650px\" \/><\/a><figcaption class=\"wp-element-caption\"><small>Making viruses using plasmids and cultured cells.<\/small><\/figcaption><\/figure>\n\n\n\n<h2 class=\"wp-block-heading\">2) Test the gene therapy on cells<\/h2>\n\n\n\n<p class=\"wp-block-paragraph\">To see whether their gene therapy viruses work, the researchers add them to a different culture of cells. These cells were taken from sheep with Batten disease and cultured in a dish. They have a mutated version of the CLN5 gene and are not well; you can see that their lysosomes don&#8217;t work very well if you look at them using a microscope and special fluorescent dyes.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">If it works, the virus transfers the correct CLN5 gene to the nucleus of the cells, integrating it into their chromosomes. The cells then start to produce the correct CLN5 protein:<\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/gene-therapy_cells_650-679728.png\"><img loading=\"lazy\" decoding=\"async\" width=\"650\" height=\"605\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/gene-therapy_cells_650-679728.png\" alt=\"A stylised illustration of a dish of cultured cells with a needle and syringe containing virus above it, and a close-up diagram of a cell being invaded by a virus underneath. \" class=\"wp-image-4040\" srcset=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/gene-therapy_cells_650-679728.png 650w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/gene-therapy_cells_650-679728-300x279.png 300w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/gene-therapy_cells_650-679728-322x300.png 322w\" sizes=\"auto, (max-width: 650px) 100vw, 650px\" \/><\/a><figcaption class=\"wp-element-caption\"><small>How the gene therapy virus works on cells to correct the mutated gene.<\/small><\/figcaption><\/figure>\n\n\n\n<p class=\"wp-block-paragraph\">The researchers are able to see whether the gene therapy works successfully by comparing treated sick cells with untreated sick cells and untreated normal cells under a microscope. In their experiments, the gene therapy-treated cells started to look more like normal cells.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">These are photos of cells from one of the experiments in the Hughes Lab:<\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/fluorescent-micrograph-of-cells_650-685268.png\"><img loading=\"lazy\" decoding=\"async\" width=\"650\" height=\"231\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/fluorescent-micrograph-of-cells_650-685268.png\" alt=\"Three micrographs featuring large blue blobs (nuclei in cells) and small green blobs (lysosomes in cells). Normal cells on left have lots of green blobs, Batten disease cells in middle have nearly no green blobs, Batten disease cells treated with gene therapy on right have lots of green blobs.\" class=\"wp-image-4041\" srcset=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/fluorescent-micrograph-of-cells_650-685268.png 650w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/fluorescent-micrograph-of-cells_650-685268-300x107.png 300w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/fluorescent-micrograph-of-cells_650-685268-500x178.png 500w\" sizes=\"auto, (max-width: 650px) 100vw, 650px\" \/><\/a><\/figure>\n\n\n\n<p class=\"wp-block-paragraph\">The blue round shapes are the nuclei of cells, stained blue using a fluorescent dye. The green spots show where lysosomes are working properly, carrying out a process called autophagy.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">You can see that there are lots of green spots on the picture of the normal cells (left), i.e. the lysosomes in those cells are working normally.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">In the cells with Batten disease (middle), the lysosomes are not working very well and have very few green spots.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">The cells with Batten disease that have been treated with the virus gene therapy have lots of green spots, and look much more like the normal cells.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">3) Test the gene therapy on an animal model<\/h2>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/an-ordinary-sheep-without-batten-disease-664222.jpg\"><img loading=\"lazy\" decoding=\"async\" width=\"418\" height=\"314\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/an-ordinary-sheep-without-batten-disease-664222.jpg\" alt=\"A close-up photo of a sheep looking at the camera.\" class=\"wp-image-4043\" srcset=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/an-ordinary-sheep-without-batten-disease-664222.jpg 418w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/an-ordinary-sheep-without-batten-disease-664222-300x225.jpg 300w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/an-ordinary-sheep-without-batten-disease-664222-399x300.jpg 399w\" sizes=\"auto, (max-width: 418px) 100vw, 418px\" \/><\/a><figcaption class=\"wp-element-caption\">An ordinary sheep without Batten disease.<\/figcaption><\/figure>\n\n\n\n<p class=\"wp-block-paragraph\">Once it was clear the gene therapy viruses were working on cells cultured in a dish, Dr Hughes and her collaborators next tested the gene therapy viruses on a flock of sheep at Lincoln University, New Zealand, that naturally develop Batten disease.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">The animals have a mutation in their CLN5 gene, as do many humans with Batten disease, and share many of the features of the human disease, including neurodegeneration, blindness and premature death.<\/p>\n\n\n<div class=\"wp-block-image\">\n<figure class=\"alignleft size-full is-resized\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-indicating-how-the-gene-therapy-virus-is-injected-into-the-brain-of-a-sheep-with-batten-disease-679727.png\"><img loading=\"lazy\" decoding=\"async\" width=\"650\" height=\"1006\" src=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-indicating-how-the-gene-therapy-virus-is-injected-into-the-brain-of-a-sheep-with-batten-disease-679727.png\" alt=\"Diagram of a sheep's brain being injected with a virus.\" class=\"wp-image-4044\" style=\"width:287px;height:auto\" srcset=\"https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-indicating-how-the-gene-therapy-virus-is-injected-into-the-brain-of-a-sheep-with-batten-disease-679727.png 650w, https:\/\/blogs.otago.ac.nz\/thesheet\/files\/2025\/10\/diagram-indicating-how-the-gene-therapy-virus-is-injected-into-the-brain-of-a-sheep-with-batten-disease-679727-194x300.png 194w\" sizes=\"auto, (max-width: 650px) 100vw, 650px\" \/><\/a><figcaption class=\"wp-element-caption\">Diagram of how the gene therapy virus might be injected into the brain of a sheep with Batten disease.<\/figcaption><\/figure>\n<\/div>\n\n\n<p class=\"wp-block-paragraph\">The sheep chosen for treatment had not yet developed symptoms of Batten disease.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">The researchers injected the viruses into the fluid-filled spaces in the sheep brains. The viruses then &#8220;infected&#8221; the brain cells, integrating the normal CLN5 gene into the cells&#8217; genomes.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">Promisingly, the treated sheep lived longer than the untreated sheep, and they did not develop most of the Batten disease problems, apart from some loss of vision.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">A clinical trial has now started for the CLN6 form of the disease on human patients with collaborators in the USA (see also curebatten.org).<\/p>\n\n\n\n<hr class=\"wp-block-separator has-alpha-channel-opacity\" \/>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/biological-implications-for-gene-therapy\/\" data-type=\"page\" data-id=\"4045\">Next: Biological implications of gene therapy<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/gene-therapy-a-cure-for-batten-disease\/\" data-type=\"page\" data-id=\"4031\">Previous: Gene therapy &#8211; a cure for Batten disease?<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/genetic-transfer-in-medicine-batten-disease\/\">Return to the main Batten disease page<\/a><\/p>\n\n\n\n<hr class=\"wp-block-separator has-alpha-channel-opacity\" \/>\n\n\n\n<p class=\"wp-block-paragraph\">Other useful links:<\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/school-resources\/\" data-type=\"page\" data-id=\"3950\">Otago Biochemistry high school resources<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/blogs.otago.ac.nz\/thesheet\/gene-editing-in-new-zealand\/\">Gene editing in New Zealand<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.otago.ac.nz\/biochemistry\">Otago Biochemistry website<\/a><\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Testing gene therapy for Batten disease in sheep Dr Stephanie Hughes and her colleagues in the Otago Department of Biochemistry have been developing special viruses as a gene therapy treatment for Batten disease. To correct for the mutation in the [&hellip;]<\/p>\n","protected":false},"author":32571,"featured_media":0,"parent":4002,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-4034","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/blogs.otago.ac.nz\/thesheet\/wp-json\/wp\/v2\/pages\/4034","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/blogs.otago.ac.nz\/thesheet\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/blogs.otago.ac.nz\/thesheet\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/blogs.otago.ac.nz\/thesheet\/wp-json\/wp\/v2\/users\/32571"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs.otago.ac.nz\/thesheet\/wp-json\/wp\/v2\/comments?post=4034"}],"version-history":[{"count":0,"href":"https:\/\/blogs.otago.ac.nz\/thesheet\/wp-json\/wp\/v2\/pages\/4034\/revisions"}],"up":[{"embeddable":true,"href":"https:\/\/blogs.otago.ac.nz\/thesheet\/wp-json\/wp\/v2\/pages\/4002"}],"wp:attachment":[{"href":"https:\/\/blogs.otago.ac.nz\/thesheet\/wp-json\/wp\/v2\/media?parent=4034"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}